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Proteins sequences are manually annotated using various computational tools viz., Virus-mPLoc, Pfam 32.0, ProtoNet, SUPERFAMILY, ExPASyProtParam, Scratch Protein Predictor, PSIPRED, TMHMM Server v. 2.0, SignalP-5.0, UbPred, NetCorona 1.0 Server, RADAR, MINNOU, BioEdit Software, MUSCLE, PHYML, NetCTL 1.2 Server, VaxiJen v. 2.0, AllerTOP v. 2.0, IEDB MHC-I Binding Predictions, IEDB MHC-II Binding Predictions, IEDB Epitope Conservancy Analysis, ToxinPred, HLAPred, Bepipred Linear Epitope Prediction 2.0, IEDB Population Coverage, PEPstrMOD and PatchDock.

Some of the useful web resources are also listed below:

ATRIO: A Composable Cloud
Clinicaltrials.Gov COVID-19 Related Studies
CORONAVIR
Covdb
COVID-19 Docking Server
Dbatvir
ELIXIR: A Resource For SARS-Cov-2 Research
Genome Detective Typing Tool
Immune Epitope Database And Analysis Resource (IEDB)
Mapmycorona
NCBI Virus
Network Bioinformatics
Nextstrain COVID-19 Genetic Epidemiology
Phyloscanner
Q-UEL Tool
Vipr
VAPOR
Virusseeker-Virome
Avcpred
Betacoronavirus BLAST
Avpdb
Avppred
GISAID
Cov2id Detection & Therapeutics OLIGO Database
VADR
Gleamviz
VIRsiRNAdb